{r analysis, include = FALSE} #source('synthetic_control_analysis.R', local = TRUE) #
Fiji Results
combine estimates
| ac_pneumonia_Age1 |
0.94 (0.79, 1.12) |
0.93 (0.77, 1.13) |
0.81 (0.57, 1.16) |
0.92 (0.67, 1.25) |
0.95 (0.77, 1.14) |
| ac_pneumonia_Age1_0 |
0.96 (0.8, 1.16) |
0.95 (0.76, 1.16) |
0.8 (0.53, 1.17) |
0.9 (0.62, 1.29) |
0.93 (0.72, 1.17) |
| ac_pneumonia_Age1_1 |
0.91 (0.73, 1.17) |
0.93 (0.75, 1.24) |
0.85 (0.57, 1.29) |
0.99 (0.73, 1.35) |
0.92 (0.76, 1.1) |
| ac_pneumonia_Age2 |
0.85 (0.68, 1.07) |
0.64 (0.52, 0.8) |
0.67 (0.47, 0.96) |
0.9 (0.64, 1.28) |
0.85 (0.63, 1.16) |
| ac_pneumonia_Age3 |
0.57 (0.45, 0.72) |
0.55 (0.44, 0.69) |
0.37 (0.25, 0.56) |
0.59 (0.39, 0.91) |
0.54 (0.33, 0.93) |
| ac_pneumonia_Age4 |
0.61 (0.48, 0.79) |
0.65 (0.46, 0.92) |
0.42 (0.27, 0.68) |
0.49 (0.32, 0.8) |
0.58 (0.42, 0.8) |
| ac_pneumonia_Age5 |
0.91 (0.71, 1.18) |
0.97 (0.78, 1.19) |
0.87 (0.62, 1.21) |
0.88 (0.65, 1.18) |
1.06 (0.8, 1.41) |
| ac_pneumonia_Age6 |
1.1 (0.86, 1.4) |
1.2 (0.96, 1.86) |
1.04 (0.7, 1.49) |
1.24 (0.89, 1.7) |
1.1 (0.85, 1.4) |
| HP_all_raw_Age1 |
0.74 (0.58, 0.94) |
0.74 (0.58, 0.95) |
0.63 (0.38, 1.04) |
0.69 (0.44, 1.11) |
0.72 (0.54, 0.97) |
| RP_all_raw_Age1 |
0.71 (0.54, 0.96) |
0.72 (0.38, 1.13) |
0.38 (0.21, 0.68) |
0.41 (0.23, 0.72) |
0.7 (0.52, 0.95) |
| VS_SP_all_raw_Age1 |
0.69 (0.52, 0.9) |
0.68 (0.52, 0.89) |
0.87 (0.54, 1.34) |
0.94 (0.6, 1.43) |
0.72 (0.54, 0.93) |
Plot of Rate ratios, with size proportional to cross validation weights
Weights for each of the models from cross validation
| ac_pneumonia_Age1 |
0.882 |
0.001 |
0.118 |
0.000 |
| ac_pneumonia_Age1_0 |
0.727 |
0.001 |
0.272 |
0.000 |
| ac_pneumonia_Age1_1 |
0.000 |
0.485 |
0.000 |
0.515 |
| ac_pneumonia_Age2 |
0.167 |
0.000 |
0.412 |
0.421 |
| ac_pneumonia_Age3 |
0.768 |
0.000 |
0.232 |
0.000 |
| ac_pneumonia_Age4 |
0.259 |
0.000 |
0.122 |
0.618 |
| ac_pneumonia_Age5 |
0.265 |
0.735 |
0.000 |
0.000 |
| ac_pneumonia_Age6 |
0.024 |
0.000 |
0.000 |
0.976 |
| HP_all_raw_Age1 |
0.942 |
0.000 |
0.058 |
0.000 |
| RP_all_raw_Age1 |
0.079 |
0.000 |
0.000 |
0.921 |
| VS_SP_all_raw_Age1 |
0.982 |
0.000 |
0.018 |
0.000 |
Inclusion Probabilities
| ac_pneumonia_Age1 |
A00_B99_norota |
0.0794717 |
ach_noj |
0.0779943 |
Q00_Q99 |
0.0676562 |
| ac_pneumonia_Age1_0 |
R00_R99 |
0.1597786 |
ach_noj |
0.0807045 |
A00_B99_norota |
0.0771365 |
| ac_pneumonia_Age1_1 |
ach_noj |
0.4678845 |
R00_R99 |
0.1069449 |
L00_L99 |
0.0907818 |
| ac_pneumonia_Age2 |
L00_L99 |
0.2210464 |
ach_noj |
0.0938043 |
R00_R99 |
0.0770964 |
| ac_pneumonia_Age3 |
L00_L99 |
0.1886030 |
R00_R99 |
0.1591931 |
K00_K95 |
0.1143463 |
| ac_pneumonia_Age4 |
M00_M99 |
0.6382860 |
N00_N99 |
0.4918235 |
pandemic |
0.4200696 |
| ac_pneumonia_Age5 |
H00_H99 |
0.1091311 |
A00_B99_norota |
0.0906234 |
N00_N99 |
0.0711120 |
| ac_pneumonia_Age6 |
H00_H99 |
0.8999845 |
ach_noj |
0.1310329 |
E00_E89 |
0.0609907 |
| HP_all_raw_Age1 |
L00_L99 |
0.7030034 |
R00_R99 |
0.1252517 |
ach_noj |
0.1241086 |
| RP_all_raw_Age1 |
ach_noj |
0.4983625 |
A00_B99_norota |
0.2276589 |
Q00_Q99 |
0.1711811 |
| VS_SP_all_raw_Age1 |
ach_noj |
0.0967894 |
Q00_Q99 |
0.0875662 |
A00_B99_norota |
0.0755335 |
Weight Sensitivity Analysis
| ac_pneumonia_Age1 |
0.93 (0.77, 1.13) |
A00_B99_norota |
0.08 |
0.94 (0.77, 1.21) |
Q00_Q99 |
0.07 |
0.94 (0.78, 1.23) |
L00_L99 |
0.07 |
0.94 (0.78, 1.21) |
| ac_pneumonia_Age1_0 |
0.95 (0.76, 1.16) |
R00_R99 |
0.16 |
0.95 (0.75, 1.18) |
A00_B99_norota |
0.08 |
0.95 (0.75, 1.18) |
L00_L99 |
0.07 |
0.95 (0.75, 1.18) |
| ac_pneumonia_Age1_1 |
0.93 (0.75, 1.24) |
R00_R99 |
0.11 |
0.95 (0.76, 1.24) |
L00_L99 |
0.09 |
0.98 (0.77, 1.26) |
pandemic |
0.07 |
1 (0.78, 1.26) |
| ac_pneumonia_Age2 |
0.64 (0.52, 0.8) |
L00_L99 |
0.22 |
0.65 (0.49, 0.81) |
R00_R99 |
0.08 |
0.65 (0.49, 0.81) |
S00_T88 |
0.07 |
0.65 (0.47, 0.8) |
| ac_pneumonia_Age3 |
0.55 (0.44, 0.69) |
L00_L99 |
0.19 |
0.54 (0.4, 0.7) |
R00_R99 |
0.16 |
0.54 (0.4, 0.7) |
K00_K95 |
0.11 |
0.54 (0.4, 0.7) |
| ac_pneumonia_Age4 |
0.65 (0.46, 0.92) |
M00_M99 |
0.64 |
0.75 (0.54, 1) |
N00_N99 |
0.49 |
0.72 (0.48, 0.95) |
pandemic |
0.42 |
0.72 (0.49, 0.95) |
| ac_pneumonia_Age5 |
0.97 (0.78, 1.19) |
H00_H99 |
0.11 |
0.98 (0.82, 1.27) |
A00_B99_norota |
0.09 |
0.98 (0.8, 1.26) |
N00_N99 |
0.07 |
0.98 (0.81, 1.27) |
| ac_pneumonia_Age6 |
1.2 (0.96, 1.86) |
H00_H99 |
0.9 |
1.71 (1.28, 2.37) |
E00_E89 |
0.06 |
1.7 (1.3, 2.41) |
E10_E14 |
0.05 |
1.74 (1.32, 2.41) |
| HP_all_raw_Age1 |
0.74 (0.58, 0.95) |
L00_L99 |
0.7 |
0.72 (0.56, 0.96) |
R00_R99 |
0.13 |
0.72 (0.57, 1) |
A00_B99_norota |
0.1 |
0.73 (0.57, 1) |
| RP_all_raw_Age1 |
0.72 (0.38, 1.13) |
A00_B99_norota |
0.23 |
0.67 (0.36, 1.12) |
Q00_Q99 |
0.17 |
0.68 (0.36, 1.12) |
R00_R99 |
0.15 |
0.64 (0.36, 1.09) |
| VS_SP_all_raw_Age1 |
0.68 (0.52, 0.89) |
Q00_Q99 |
0.09 |
0.68 (0.51, 0.93) |
A00_B99_norota |
0.08 |
0.69 (0.52, 0.93) |
L00_L99 |
0.07 |
0.69 (0.52, 0.97) |
